iPad Supported Video Formats & Movie Formats(http://www.aneesoft.com/tutorials/ipad-supported-video-format.html).
* H.264 video up to 720p, 30 frames per second, Main Profile level 3.1 with AAC-LC audio up to 160 Kbps, 48kHz, stereo audio in .m4v, .mp4, and .mov file formats;
* MPEG-4 video, up to 2.5 Mbps, 640 by 480 pixels, 30 frames per second, Simple Profile with AAC-LC audio up to 160 Kbps, 48kHz, stereo audio in .m4v, .mp4, and .mov file formats;
* Motion JPEG (M-JPEG) up to 35 Mbps, 1280 by 720 pixels, 30 frames per second, audio in ulaw, PCM stereo audio in .avi file format.
And if you need a good iPad converter,I recommend Handbrake(convert anything to MP4 and MKV) or Aneesoft iPad Video Converter.